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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
9
DNase-seq
8
ChIP-seq
1
FAIRE-seq
Assay category
56
DNA accessibility
8
DNA binding
Target of assay
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
35
February, 2023
12
February, 2021
6
October, 2019
5
June, 2019
3
May, 2019
2
July, 2019
1
November, 2017
Available data
110
bam
83
bigWig
68
tsv
64
bed narrowPeak
14
bigBed narrowPeak
11
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
6
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
64
Homo sapiens
Biosample type
46
tissue
12
cell line
6
primary cell
Organ
361
liver
153
kidney
89
heart
87
pancreas
67
vasculature
64
blood vessel
63
epithelium
54
artery
53
blood
53
bodily fluid
44
limb
40
connective tissue
36
brain
33
musculature of body
32
eye
18
ureter
11
adipose tissue
8
bone element
8
skeleton
8
spleen
3
embryo
3
nerve
3
vein
Project
64
AMP
Genome assembly (visualization)
63
GRCh38
28
hg19
Lab
64
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ATAC-seq
DNase-seq
ChIP-seq
FAIRE-seq
tissue
coronary artery
36
2
1
tibial artery
1
2
ascending aorta
1
1
thoracic aorta
1
1
cell line
smooth muscle cell of the coronary artery
8
4
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
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