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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
54
ChIP-seq
13
ATAC-seq
Assay category
58
Transcription
54
DNA binding
13
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
Date released
66
February, 2021
27
December, 2018
15
January, 2019
12
November, 2018
4
February, 2023
1
January, 2018
Available data
120
bam
113
bigWig
62
bed narrowPeak
58
tsv
54
bigBed narrowPeak
54
fastq
4
bed bed3
Organism
125
Homo sapiens
Biosample type
70
tissue
55
cell line
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
125
AMP
Genome assembly (visualization)
125
hg19
120
GRCh38
Lab
125
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
125 results
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total RNA-seq
ChIP-seq
ATAC-seq
tissue
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 8 more…
cell line
GM12878
54
1
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