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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
4
total RNA-seq
2
ATAC-seq
2
DNase-seq
Assay category
78
DNA binding
4
DNA accessibility
4
Transcription
Target of assay
51
transcription factor
25
histone
25
histone modification
16
broad histone mark
10
RNA binding protein
10
chromatin remodeller
9
narrow histone mark
Date released
31
October, 2019
27
December, 2018
15
January, 2019
12
November, 2018
1
January, 2018
Available data
86
bigWig
85
bam
81
bed narrowPeak
80
bigBed narrowPeak
54
fastq
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
86
Homo sapiens
Biosample type
55
cell line
31
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
86
AMP
Genome assembly (visualization)
86
hg19
85
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
cell line
GM12878
54
1
tissue
tibial nerve
24
4
1
2
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