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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
25
DNA binding
9
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
13
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
Available data
25
bam
25
fastq
20
bigWig
19
bed narrowPeak
19
bigBed narrowPeak
Organism
34
Homo sapiens
Biosample type
26
cell line
8
primary cell
Organ
946
pancreas
767
liver
682
connective tissue
523
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
37
embryo
34
blood
34
bodily fluid
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
8
T1D
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
26
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
December, 2018
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
25
1
primary cell
peripheral blood mononuclear cell
8
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