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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
15
ChIP-seq
8
snATAC-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
43
DNA accessibility
15
DNA binding
4
Transcription
Target of assay
15
control
Date released
35
February, 2023
8
January, 2021
5
October, 2019
3
January, 2019
3
November, 2018
2
August, 2021
2
February, 2020
2
February, 2021
2
May, 2019
Available data
35
bed narrowPeak
15
bam
6
fastq
4
tsv
2
tagAlign
Organism
62
Homo sapiens
Biosample type
46
tissue
8
cell line
8
primary cell
Organ
288
pancreas
225
kidney
213
epithelium
166
liver
165
heart
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
8
T1D
Genome assembly (visualization)
182
GRCh38
hg19
Lab
54
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assembly!
hg19
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ATAC-seq
ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
cell line
GM12878
6
smooth muscle cell of the coronary artery
2
primary cell
peripheral blood mononuclear cell
8
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