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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
Assay category
118
DNA binding
Target of assay
188
histone
188
histone modification
118
narrow histone mark
70
broad histone mark
54
transcription factor
37
control
13
RNA binding protein
10
chromatin remodeller
Date released
74
October, 2019
31
November, 2017
10
May, 2019
2
October, 2017
1
January, 2019
Available data
107
bed narrowPeak
107
bigWig
106
bam
54
tagAlign
34
bigBed narrowPeak
8
bed broadPeak
5
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
118
Homo sapiens
Biosample type
114
tissue
3
primary cell
1
cell line
Organ
117
brain
73
pancreas
60
liver
49
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
118
AMP
Genome assembly (visualization)
108
GRCh38
93
hg19
Lab
118
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
tissue
layer of hippocampus
8
angular gyrus
7
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
+ See 63 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
GM12878
1
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