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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
49
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
narrow histone mark
Date released
25
December, 2018
13
November, 2018
11
January, 2019
8
January, 2021
1
January, 2018
Available data
49
bam
49
fastq
44
bigWig
43
bed narrowPeak
43
bigBed narrowPeak
Organism
58
Homo sapiens
Biosample type
50
cell line
8
primary cell
Organ
864
pancreas
673
liver
641
connective tissue
474
adipose tissue
467
epithelium
336
kidney
322
heart
205
vasculature
201
blood vessel
166
brain
159
bone element
134
artery
107
limb
83
musculature of body
58
blood
58
bodily fluid
57
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
50
AMP
8
T1D
Genome assembly (visualization)
44
hg19
43
GRCh38
Lab
50
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
narrow histone mark
RNA binding protein
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
49
1
primary cell
peripheral blood mononuclear cell
8
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