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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
3
ChIP-seq
1
ATAC-seq
Assay category
9
DNA accessibility
3
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
2
December, 2018
1
January, 2018
1
January, 2019
Available data
4
bigWig
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
fastq
Organism
12
Homo sapiens
Biosample type
8
primary cell
4
cell line
Organ
874
pancreas
609
connective tissue
485
epithelium
450
adipose tissue
345
liver
332
kidney
321
heart
252
brain
205
vasculature
201
blood vessel
159
bone element
127
artery
105
limb
90
musculature of body
59
eye
32
nerve
27
embryo
20
lung
20
vein
18
ureter
16
skeleton
12
blood
12
bodily fluid
11
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
8
T1D
4
AMP
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
8
Kyle Gaulton, UCSD
4
AMP-T2D consortium
target.investigated_as!
transcription factor
control
BIOSAMPLE
ASSAY
12 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
3
1
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