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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
ChIP-seq
Assay category
188
DNA binding
Target of assay
188
histone
188
histone modification
118
narrow histone mark
70
broad histone mark
54
transcription factor
37
control
13
RNA binding protein
10
chromatin remodeller
Date released
77
October, 2019
73
November, 2017
25
May, 2019
12
October, 2017
1
January, 2019
Available data
168
bed narrowPeak
167
bam
167
bigWig
99
tagAlign
92
bigBed narrowPeak
12
bed broadPeak
11
fastq
3
bigBed broadPeak
1
tagAlign bed3+
Organism
188
Homo sapiens
Biosample type
184
tissue
3
primary cell
1
cell line
Organ
187
brain
151
pancreas
103
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
188
AMP
Genome assembly (visualization)
169
GRCh38
118
hg19
Lab
188
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
188 results
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ChIP-seq
tissue
layer of hippocampus
20
brain
17
angular gyrus
14
substantia nigra
14
caudate nucleus
13
+ See 63 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
GM12878
1
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