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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
91
transcription factor
79
histone
79
histone modification
44
broad histone mark
41
control
34
narrow histone mark
20
RNA binding protein
12
chromatin remodeller
Date released
34
August, 2017
25
December, 2018
14
January, 2019
12
November, 2018
5
October, 2018
1
June, 2019
Available data
91
bam
91
bigWig
90
fastq
74
bed narrowPeak
57
bigBed narrowPeak
10
bed bed3+
Organism
91
Homo sapiens
Biosample type
51
cell line
22
in vitro differentiated cells
17
tissue
1
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
91
AMP
Genome assembly (visualization)
91
GRCh38
91
hg19
Lab
91
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
cell line
GM12878
51
in vitro differentiated cells
adipocyte
22
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
primary cell
cardiac fibroblast
1
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