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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
4
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
4
DNA accessibility
Date released
58
February, 2021
8
February, 2023
1
May, 2021
Available data
66
bam
58
bigWig
58
tsv
bed narrowPeak
4
bed bed3
4
txt
Organism
67
Homo sapiens
Biosample type
66
tissue
1
primary cell
Organ
665
pancreas
601
connective tissue
478
adipose tissue
350
liver
304
epithelium
200
heart
160
kidney
103
vasculature
101
blood vessel
82
brain
67
artery
67
bone element
35
musculature of body
30
limb
28
eye
20
lung
19
embryo
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
66
AMP
1
T1D
Genome assembly (visualization)
62
hg19
58
GRCh38
Lab
66
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
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audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
primary cell
megakaryocyte
1
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