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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
Assay category
52
DNA binding
Target of assay
333
transcription factor
83
histone modification
82
histone
81
recombinant protein
56
RNA binding protein
52
narrow histone mark
30
broad histone mark
23
chromatin remodeller
13
control
2
other context
2
other post-translational modification
Date released
27
May, 2020
7
December, 2017
7
November, 2017
5
August, 2017
4
August, 2021
2
October, 2019
Available data
52
bigWig
51
bed narrowPeak
50
bam
40
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
52
Homo sapiens
Biosample type
36
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
106
brain
69
pancreas
52
liver
48
epithelium
40
heart
25
vasculature
24
blood vessel
18
connective tissue
15
kidney
14
limb
11
musculature of body
8
nerve
7
embryo
6
artery
5
vein
2
adipose tissue
2
spleen
1
blood
1
bodily fluid
1
eye
1
pituitary gland
0
bone element
Project
52
AMP
Genome assembly (visualization)
52
hg19
41
GRCh38
Lab
50
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
tissue
liver
34
right lobe of liver
2
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
5
primary cell
hepatocyte
2
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