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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
33
ATAC-seq
4
DNase-seq
2
ChIP-seq
1
RRBS
Assay category
58
Transcription
37
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
60
February, 2021
31
February, 2023
6
June, 2019
1
July, 2019
Available data
66
bam
64
bigWig
58
tsv
35
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
98
Homo sapiens
Biosample type
94
tissue
4
primary cell
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
98
AMP
Genome assembly (visualization)
98
hg19
66
GRCh38
Lab
98
AMP-T2D consortium
organ_slims!
limb
BIOSAMPLE
ASSAY
98 results
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total RNA-seq
ATAC-seq
DNase-seq
ChIP-seq
RRBS
tissue
bone tissue
58
retina
15
3
pigmented layer of retina
12
acetabular part of hip bone
1
distal epiphysis
1
+ See 4 more…
primary cell
retinal pigment epithelial cell
1
2
1
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