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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
8
snATAC-seq
1
pCHi-C
Assay category
62
Transcription
20
DNA accessibility
Date released
150
February, 2021
8
February, 2023
8
January, 2021
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
167
Homo sapiens
Biosample type
158
tissue
cell line
9
primary cell
Organ
854
pancreas
684
connective tissue
491
adipose tissue
445
epithelium
390
liver
335
kidney
287
heart
286
brain
170
vasculature
164
blood vessel
159
bone element
122
limb
96
musculature of body
75
artery
61
eye
43
nerve
29
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
158
AMP
9
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
158
AMP-T2D consortium
9
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
167 results
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RNA microarray
total RNA-seq
ATAC-seq
snATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
+ See 9 more…
primary cell
peripheral blood mononuclear cell
8
megakaryocyte
1
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