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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
13
ATAC-seq
8
snATAC-seq
1
pCHi-C
Assay category
62
Transcription
DNA binding
21
DNA accessibility
Date released
150
February, 2021
8
February, 2023
8
January, 2021
1
January, 2018
1
May, 2021
Available data
88
txt
66
bam
59
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
168
Homo sapiens
Biosample type
158
tissue
9
primary cell
1
cell line
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
159
AMP
9
T1D
Genome assembly (visualization)
71
hg19
66
GRCh38
Lab
159
AMP-T2D consortium
9
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
168 results
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RNA microarray
total RNA-seq
ATAC-seq
snATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
+ See 9 more…
primary cell
peripheral blood mononuclear cell
8
megakaryocyte
1
cell line
GM12878
1
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