Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
16
ChIP-seq
8
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
16
DNA binding
12
DNA accessibility
Target of assay
11
histone
11
histone modification
6
narrow histone mark
5
broad histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
12
October, 2019
2
July, 2019
2
June, 2019
2
November, 2017
Available data
82
bam
74
bigWig
54
tsv
28
bed narrowPeak
16
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
4
tagAlign
2
fastq
Organism
82
Homo sapiens
Biosample type
tissue
64
cell line
18
primary cell
Organ
294
epithelium
293
liver
249
pancreas
86
connective tissue
86
vasculature
82
blood vessel
75
heart
66
artery
54
blood
54
bodily fluid
40
kidney
29
embryo
14
brain
12
vein
11
musculature of body
3
eye
2
adipose tissue
1
pericardium
0
bone marrow
Project
82
AMP
Genome assembly (visualization)
89
hg19
82
GRCh38
Lab
82
AMP-T2D consortium
biosample_type!
tissue
BIOSAMPLE
ASSAY
82 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
Download