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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
Assay category
101
DNA binding
37
DNA accessibility
24
Transcription
3
3D chromatin structure
2
DNA methylation
Target of assay
187
histone
187
histone modification
narrow histone mark
70
broad histone mark
28
control
3
RNA binding protein
3
transcription factor
Date released
60
November, 2017
18
May, 2019
13
October, 2017
10
October, 2019
Available data
91
bam
66
bigWig
64
bed narrowPeak
64
tagAlign
61
bigBed narrowPeak
14
fastq
7
bed broadPeak
3
bigBed broadPeak
Organism
101
Homo sapiens
Biosample type
95
tissue
6
primary cell
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
80
epithelium
76
vasculature
74
blood vessel
69
heart
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
14
embryo
11
vein
2
eye
Project
101
AMP
Genome assembly (visualization)
64
GRCh38
31
hg19
Lab
101
AMP-T2D consortium
Audit category:
3
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
tissue
brain
16
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
temporal lobe
10
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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