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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
212
ChIP-seq
30
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
single cell RNA-seq
2
Hi-C
2
pCHi-C
1
FAIRE-seq
1
RRBS
Assay category
212
DNA binding
Target of assay
185
histone
185
histone modification
115
narrow histone mark
70
broad histone mark
26
control
1
RNA binding protein
1
transcription factor
Date released
85
November, 2017
84
October, 2019
28
May, 2019
15
October, 2017
Available data
190
bam
166
bed narrowPeak
166
bigWig
118
tagAlign
90
bigBed narrowPeak
12
fastq
11
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
212
Homo sapiens
Biosample type
209
tissue
3
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
212
AMP
Genome assembly (visualization)
167
GRCh38
117
hg19
Lab
212
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
epithelium
BIOSAMPLE
ASSAY
212 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
23
brain
20
substantia nigra
16
angular gyrus
15
caudate nucleus
15
+ See 63 more…
primary cell
astrocyte of the cerebellum
3
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