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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
218
ChIP-seq
32
DNase-seq
17
total RNA-seq
4
ATAC-seq
4
small RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
FAIRE-seq
Assay category
32
DNA accessibility
4
Transcription
Date released
30
June, 2019
4
July, 2019
2
November, 2018
Available data
36
bam
36
bigWig
32
bed bed3+
32
bed broadPeak
32
bed narrowPeak
32
bigBed broadPeak
32
bigBed narrowPeak
4
tsv
2
fastq
Organism
36
Homo sapiens
Biosample type
31
tissue
5
primary cell
Organ
82
kidney
36
brain
36
limb
35
musculature of body
31
heart
19
epithelium
18
ureter
12
connective tissue
11
vasculature
10
pancreas
9
blood vessel
9
liver
5
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
spleen
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
26
hg19
Lab
36
AMP-T2D consortium
BIOSAMPLE
ASSAY
36 results
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DNase-seq
small RNA-seq
tissue
brain
14
frontal cortex
2
1
cerebellum (Hemisphere)
1
1
Ammon's horn
1
caudate nucleus
1
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
See all biosamples
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