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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
270
ChIP-seq
113
DNase-seq
79
ATAC-seq
77
total RNA-seq
67
single cell RNA-seq
6
RRBS
6
snATAC-seq
5
small RNA-seq
4
Hi-C
4
pCHi-C
3
snDrop-seq
2
FAIRE-seq
2
RNA microarray
2
STARR-seq
Assay category
77
Transcription
Date released
49
August, 2021
12
February, 2020
9
July, 2019
7
October, 2019
Available data
49
txt
28
tsv
16
bam
16
bigWig
Organism
77
Homo sapiens
Biosample type
67
tissue
6
primary cell
4
cell line
Organ
474
connective tissue
403
pancreas
398
adipose tissue
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
77
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
49
Katalin Susztak, Upenn
28
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
tissue
kidney
49
cerebellum
2
frontal cortex
2
Ammon's horn
1
amygdala
1
+ See 12 more…
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
+ See 1 more…
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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