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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
total RNA-seq
2
pCHi-C
1
FAIRE-seq
Assay category
12
Transcription
1
DNA accessibility
Date released
12
February, 2020
2
March, 2020
1
July, 2019
Available data
36
tagAlign
28
bam
14
tsv
8
bigWig
6
fastq
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3
1
bed broadPeak
1
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
98
heart
44
liver
15
brain
13
kidney
13
pancreas
11
blood vessel
11
epithelium
11
vasculature
7
connective tissue
5
eye
4
adipose tissue
4
artery
4
limb
4
musculature of body
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
15
AMP
Genome assembly (visualization)
GRCh38
77
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
15 results
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total RNA-seq
pCHi-C
FAIRE-seq
tissue
Ammon's horn
1
1
frontal cortex
1
1
amygdala
1
anterior cingulate cortex
1
caudate nucleus
1
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