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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
3
Hi-C
1
FAIRE-seq
Assay category
4
DNA binding
3
3D chromatin structure
1
DNA accessibility
Target of assay
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
4
July, 2019
4
November, 2017
Available data
36
tagAlign
28
bam
16
tsv
8
bigWig
6
fastq
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3
1
bed broadPeak
1
bigBed narrowPeak
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
tissue
Organ
94
liver
15
musculature of body
12
pancreas
9
epithelium
8
brain
8
connective tissue
7
vasculature
6
blood vessel
3
adipose tissue
3
vein
1
blood
1
bodily fluid
1
embryo
1
heart
1
kidney
1
limb
0
intestine
Project
8
AMP
Genome assembly (visualization)
GRCh38
159
hg19
Lab
8
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
Hi-C
FAIRE-seq
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
choroid plexus epithelial cell
1
tissue
cingulate gyrus
1
frontal cortex
1
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