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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
3
Hi-C
2
RRBS
1
ATAC-seq
1
FAIRE-seq
Assay category
4
DNA binding
3
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
6
July, 2019
4
November, 2017
1
February, 2023
Available data
8
bigWig
4
bam
3
bed bed3+
3
fastq
3
hdf5
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3
1
bed broadPeak
1
bigBed narrowPeak
1
tagAlign
Organism
11
Homo sapiens
Biosample type
7
primary cell
4
tissue
Organ
99
liver
39
pancreas
33
epithelium
28
eye
26
connective tissue
21
musculature of body
11
brain
11
vasculature
9
blood vessel
6
heart
6
kidney
5
vein
4
adipose tissue
4
bone element
4
skeleton
1
blood
1
bodily fluid
1
limb
1
pericardium
Project
11
AMP
Genome assembly (visualization)
GRCh38
164
hg19
Lab
11
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
Hi-C
RRBS
ATAC-seq
FAIRE-seq
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
brain pericyte
1
tissue
brain
1
1
cingulate gyrus
1
frontal cortex
1
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