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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
27
DNase-seq
5
total RNA-seq
4
small RNA-seq
2
ATAC-seq
Assay category
165
DNA binding
29
DNA accessibility
9
Transcription
Target of assay
165
histone
165
histone modification
104
narrow histone mark
61
broad histone mark
Date released
78
October, 2019
57
November, 2017
25
June, 2019
25
May, 2019
9
July, 2019
7
October, 2017
2
November, 2018
Available data
201
bam
200
bigWig
190
bed narrowPeak
115
bigBed narrowPeak
82
tagAlign
35
bed broadPeak
27
bed bed3+
27
bigBed broadPeak
9
fastq
9
tsv
1
tagAlign bed3+
Organism
203
Homo sapiens
Biosample type
203
tissue
14
primary cell
Organ
480
connective tissue
422
adipose tissue
386
pancreas
238
liver
203
brain
165
kidney
151
heart
105
blood vessel
105
vasculature
96
limb
66
bone element
62
artery
42
musculature of body
31
nerve
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
203
AMP
Genome assembly (visualization)
203
GRCh38
143
hg19
Lab
203
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
203 results
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ChIP-seq
DNase-seq
total RNA-seq
small RNA-seq
ATAC-seq
tissue
brain
11
14
1
layer of hippocampus
17
temporal lobe
13
1
1
angular gyrus
14
caudate nucleus
12
1
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