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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
DNase-seq
9
ChIP-seq
Assay category
27
DNA accessibility
9
DNA binding
Target of assay
9
histone
9
histone modification
5
narrow histone mark
4
broad histone mark
Date released
25
June, 2019
6
November, 2017
3
October, 2017
2
November, 2018
Available data
226
bam
202
bigWig
192
bed narrowPeak
118
tagAlign
116
bigBed narrowPeak
36
bed broadPeak
27
bed bed3+
27
bigBed broadPeak
23
tsv
12
fastq
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
36
Homo sapiens
Biosample type
36
tissue
11
primary cell
Organ
68
kidney
45
musculature of body
36
brain
36
limb
27
heart
20
pancreas
18
ureter
5
blood vessel
5
vasculature
4
artery
3
adipose tissue
3
connective tissue
3
eye
3
liver
2
nerve
1
spleen
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
26
hg19
Lab
36
AMP-T2D consortium
Audit category:
2
missing controlled_by
BIOSAMPLE
ASSAY
36 results
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DNase-seq
ChIP-seq
tissue
brain
14
3
caudate nucleus
1
1
cingulate gyrus
2
frontal cortex
2
middle frontal area 46
2
Ammon's horn
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
substantia nigra
1
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