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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
Hi-C
3
single cell RNA-seq
1
RRBS
Assay category
3
3D chromatin structure
3
DNA binding
3
Transcription
1
DNA methylation
Target of assay
6
control
Date released
7
July, 2019
3
November, 2017
Available data
20
bigWig
17
bam
11
bed broadPeak
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
10
Homo sapiens
Biosample type
73
tissue
10
primary cell
Organ
300
epithelium
278
pancreas
22
connective tissue
16
vasculature
14
blood vessel
14
kidney
10
brain
9
vein
8
blood
8
bodily fluid
8
liver
7
heart
5
musculature of body
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
Project
10
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
10
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
Hi-C
single cell RNA-seq
RRBS
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
cerebellar granule cell
2
choroid plexus epithelial cell
1
1
Purkinje cell
1
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