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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
33
DNA accessibility
3
DNA binding
Target of assay
histone
167
histone modification
106
narrow histone mark
61
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
30
June, 2019
3
November, 2017
2
November, 2018
1
July, 2019
Available data
77
bam
56
bigWig
36
bed narrowPeak
36
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
26
tsv
19
tagAlign
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
36
Homo sapiens
Biosample type
28
tissue
8
primary cell
Organ
361
liver
153
kidney
89
heart
87
pancreas
67
vasculature
64
blood vessel
63
epithelium
54
artery
53
blood
53
bodily fluid
44
limb
40
connective tissue
36
brain
33
musculature of body
32
eye
18
ureter
11
adipose tissue
8
bone element
8
skeleton
8
spleen
3
embryo
3
nerve
3
vein
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
26
hg19
Lab
36
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
36 results
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DNase-seq
ChIP-seq
FAIRE-seq
tissue
brain
14
frontal cortex
2
1
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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