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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
DNA accessibility
Target of assay
10
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
9
November, 2017
9
October, 2017
Available data
208
bam
187
bigWig
170
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
26
tsv
18
fastq
15
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
tagAlign bed3+
Organism
18
Homo sapiens
Biosample type
9
primary cell
9
tissue
Organ
461
liver
410
pancreas
225
epithelium
97
connective tissue
60
blood
60
bodily fluid
41
adipose tissue
27
embryo
22
spleen
18
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
18
AMP
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
4
missing controlled_by
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
brain
9
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