Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
DNase-seq
2
RRBS
1
ATAC-seq
Assay category
18
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
10
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
10
October, 2017
9
November, 2017
2
July, 2019
2
November, 2018
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
23
Homo sapiens
Biosample type
13
tissue
10
primary cell
Organ
473
pancreas
466
liver
263
epithelium
102
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
23
brain
8
heart
8
vasculature
4
blood vessel
4
kidney
4
musculature of body
1
eye
1
limb
1
pericardium
Project
23
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
RRBS
ATAC-seq
tissue
brain
9
2
1
cerebellum (Hemisphere)
1
primary cell
choroid plexus epithelial cell
3
1
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
Download