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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
128
DNA binding
3
DNA accessibility
Target of assay
102
histone
102
histone modification
57
narrow histone mark
45
broad histone mark
23
control
3
RNA binding protein
3
transcription factor
Date released
75
November, 2017
38
October, 2019
16
October, 2017
2
November, 2018
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
131
Homo sapiens
Biosample type
122
tissue
9
primary cell
Organ
539
liver
483
pancreas
264
epithelium
131
brain
123
connective tissue
60
blood
60
bodily fluid
52
adipose tissue
27
embryo
24
spleen
17
musculature of body
12
vasculature
9
blood vessel
6
artery
6
heart
1
pituitary gland
Project
131
AMP
Genome assembly (visualization)
91
GRCh38
54
hg19
Lab
131
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
131 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
brain
15
2
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
cingulate gyrus
14
+ See 29 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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