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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
3
Hi-C
Assay category
118
DNA binding
3
3D chromatin structure
Target of assay
99
histone
99
histone modification
54
narrow histone mark
45
broad histone mark
19
control
Date released
66
November, 2017
38
October, 2019
14
October, 2017
3
July, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
121
Homo sapiens
Biosample type
118
tissue
3
primary cell
Organ
121
brain
87
liver
23
connective tissue
20
pancreas
15
musculature of body
9
epithelium
8
adipose tissue
8
blood vessel
8
vasculature
6
artery
6
heart
1
pituitary gland
Project
121
AMP
Genome assembly (visualization)
82
GRCh38
46
hg19
Lab
121
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
121 results
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ChIP-seq
Hi-C
tissue
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
brain
14
cingulate gyrus
14
+ See 29 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
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