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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
4
ATAC-seq
3
Hi-C
1
FAIRE-seq
Assay category
218
DNA binding
37
DNA accessibility
24
Transcription
3
3D chromatin structure
2
DNA methylation
Date released
30
June, 2019
5
July, 2019
2
November, 2018
1
February, 2023
1
October, 2017
1
October, 2019
Available data
38
bigWig
35
bam
35
bed bed3+
33
bed narrowPeak
33
bigBed narrowPeak
32
bed broadPeak
32
bigBed broadPeak
3
fastq
3
hdf5
1
bed bed3
Organism
40
Homo sapiens
Biosample type
32
tissue
8
primary cell
Organ
177
pancreas
164
kidney
128
epithelium
78
heart
61
vasculature
59
blood vessel
49
artery
48
limb
40
brain
39
musculature of body
35
connective tissue
32
eye
32
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
4
vein
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
40
AMP
Genome assembly (visualization)
34
GRCh38
27
hg19
Lab
40
AMP-T2D consortium
month_released!
March, 2020
BIOSAMPLE
ASSAY
40 results
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DNase-seq
ATAC-seq
Hi-C
FAIRE-seq
tissue
brain
14
1
frontal cortex
2
1
cerebellum (Hemisphere)
1
1
Ammon's horn
1
caudate nucleus
1
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primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
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