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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
352
ChIP-seq
96
single cell RNA-seq
87
total RNA-seq
62
DNase-seq
51
ATAC-seq
8
WGBS
5
small RNA-seq
4
Hi-C
4
RRBS
1
FAIRE-seq
Assay category
62
DNA accessibility
Date released
60
June, 2019
2
November, 2018
Available data
62
bam
62
bed bed3+
62
bed broadPeak
62
bed narrowPeak
62
bigBed broadPeak
62
bigBed narrowPeak
62
bigWig
2
fastq
Organism
62
Homo sapiens
Biosample type
54
tissue
8
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
62
AMP
Genome assembly (visualization)
62
GRCh38
49
hg19
Lab
62
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
March, 2020
BIOSAMPLE
ASSAY
62 results
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DNase-seq
tissue
heart
18
brain
14
heart left ventricle
3
coronary artery
2
frontal cortex
2
+ See 14 more…
primary cell
cardiac fibroblast
3
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
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