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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
DNase-seq
6
ChIP-seq
Assay category
110
DNA accessibility
6
DNA binding
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
108
June, 2019
6
November, 2017
2
November, 2018
Available data
380
bed narrowPeak
378
bam
346
bigWig
225
bigBed narrowPeak
122
bed broadPeak
116
bigBed broadPeak
113
bed bed3+
104
tagAlign
64
xls
62
txt
50
tsv
11
fastq
6
bed bedMethyl
6
bigBed bedMethyl
5
csv
3
hdf5
1
bed bed3
1
hic
1
tagAlign bed3+
Organism
116
Homo sapiens
Biosample type
95
tissue
21
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
116
AMP
Genome assembly (visualization)
116
GRCh38
99
hg19
Lab
116
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2017
BIOSAMPLE
ASSAY
116 results
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DNase-seq
ChIP-seq
tissue
brain
14
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
+ See 17 more…
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
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