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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
4
total RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
Assay category
11
Transcription
3
3D chromatin structure
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
85
October, 2019
28
May, 2019
16
July, 2019
15
October, 2017
12
February, 2020
2
March, 2020
Available data
14
bigWig
11
bam
11
tsv
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
Organism
16
Homo sapiens
Biosample type
9
tissue
7
primary cell
Organ
21
heart
18
connective tissue
16
brain
13
epithelium
12
adipose tissue
10
kidney
10
liver
10
musculature of body
10
vasculature
9
blood vessel
6
pancreas
5
limb
2
artery
2
pericardium
1
eye
Project
16
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
16
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
16 results
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small RNA-seq
total RNA-seq
Hi-C
single cell RNA-seq
RRBS
tissue
diencephalon
1
1
frontal cortex
1
1
temporal lobe
1
1
brain
1
cerebellum
1
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primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
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