Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
4
total RNA-seq
3
single cell RNA-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
1
RRBS
Assay category
11
Transcription
2
3D chromatin structure
2
DNA accessibility
1
DNA methylation
Target of assay
3
control
Date released
86
October, 2019
85
November, 2017
28
June, 2019
28
May, 2019
16
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
15
bigWig
13
bam
11
tsv
2
bed bed3+
2
hdf5
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed narrowPeak
Organism
16
Homo sapiens
Biosample type
11
tissue
5
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
16
AMP
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
16
AMP-T2D consortium
organ_slims!
vasculature
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
total RNA-seq
single cell RNA-seq
Hi-C
ATAC-seq
FAIRE-seq
RRBS
tissue
frontal cortex
1
1
1
diencephalon
1
1
temporal lobe
1
1
brain
1
cerebellum
1
+ See 2 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain pericyte
1
See all biosamples
Download