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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
DNase-seq
15
ChIP-seq
1
ATAC-seq
Assay category
26
DNA accessibility
15
DNA binding
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
86
October, 2019
82
November, 2017
28
May, 2019
25
June, 2019
16
October, 2017
12
February, 2020
11
July, 2019
2
March, 2020
2
November, 2018
1
February, 2023
Available data
34
bam
32
bigWig
31
bed narrowPeak
31
bigBed narrowPeak
28
bed broadPeak
25
bed bed3+
25
bigBed broadPeak
14
tagAlign
10
fastq
Organism
41
Homo sapiens
Biosample type
41
tissue
5
primary cell
Organ
68
kidney
41
brain
32
limb
32
musculature of body
27
heart
18
ureter
9
pancreas
3
blood vessel
3
eye
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
1
spleen
Project
41
AMP
Genome assembly (visualization)
32
GRCh38
21
hg19
Lab
41
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
41 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
12
15
cerebellum (Hemisphere)
1
1
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
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