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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
31
DNase-seq
1
FAIRE-seq
Assay category
168
DNA binding
32
DNA accessibility
Target of assay
166
histone
166
histone modification
105
narrow histone mark
61
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
75
October, 2019
62
November, 2017
29
June, 2019
25
May, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
239
bam
217
bigWig
200
bed narrowPeak
124
bigBed narrowPeak
118
tagAlign
44
bed broadPeak
35
bigBed broadPeak
33
bed bed3+
26
tsv
18
fastq
2
bed bedMethyl
2
bigBed bedMethyl
2
hdf5
1
bed bed3
1
tagAlign bed3+
Organism
200
Homo sapiens
Biosample type
192
tissue
8
primary cell
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
200
AMP
Genome assembly (visualization)
198
GRCh38
138
hg19
Lab
200
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
200 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
11
14
layer of hippocampus
17
angular gyrus
14
caudate nucleus
12
1
temporal lobe
13
+ See 68 more…
primary cell
astrocyte of the cerebellum
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
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