Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
205
ChIP-seq
32
DNase-seq
1
FAIRE-seq
Assay category
205
DNA binding
33
DNA accessibility
Target of assay
183
histone
183
histone modification
113
narrow histone mark
70
broad histone mark
19
control
3
RNA binding protein
3
transcription factor
Date released
84
November, 2017
82
October, 2019
30
June, 2019
25
May, 2019
14
October, 2017
2
November, 2018
1
July, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
238
Homo sapiens
Biosample type
227
tissue
11
primary cell
Organ
488
liver
238
brain
219
pancreas
193
heart
183
kidney
153
epithelium
135
vasculature
131
blood vessel
96
connective tissue
92
limb
76
artery
62
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
20
adipose tissue
18
ureter
14
embryo
14
spleen
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
238
AMP
Genome assembly (visualization)
201
GRCh38
141
hg19
Lab
238
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
intestine
BIOSAMPLE
ASSAY
238 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
19
14
layer of hippocampus
21
caudate nucleus
15
1
substantia nigra
16
angular gyrus
14
+ See 68 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
Download