Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
32
DNase-seq
1
FAIRE-seq
Assay category
64
DNA binding
33
DNA accessibility
Target of assay
167
histone
167
histone modification
narrow histone mark
61
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
41
November, 2017
30
June, 2019
15
May, 2019
5
October, 2017
3
October, 2019
2
November, 2018
1
July, 2019
Available data
138
bam
116
bigWig
97
bed narrowPeak
94
bigBed narrowPeak
64
tagAlign
39
bed broadPeak
35
bed bed3+
35
bigBed broadPeak
26
tsv
17
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
97
Homo sapiens
Biosample type
89
tissue
8
primary cell
Organ
390
liver
168
kidney
155
pancreas
151
heart
108
vasculature
105
blood vessel
103
epithelium
97
brain
78
limb
68
artery
57
connective tissue
53
blood
53
bodily fluid
49
musculature of body
32
eye
19
nerve
18
ureter
12
spleen
11
adipose tissue
8
bone element
8
skeleton
8
vein
7
embryo
Project
97
AMP
Genome assembly (visualization)
96
GRCh38
51
hg19
Lab
97
AMP-T2D consortium
Audit category:
2
missing controlled_by
organ_slims!
intestine
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
97 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
8
14
layer of hippocampus
10
caudate nucleus
8
1
substantia nigra
8
temporal lobe
8
+ See 14 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
Download