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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
Assay category
43
DNA binding
Target of assay
265
histone
265
histone modification
150
narrow histone mark
114
broad histone mark
66
control
43
transcription factor
13
RNA binding protein
2
chromatin remodeller
Date released
34
August, 2017
5
October, 2018
3
November, 2017
1
June, 2019
Available data
43
bam
43
bigWig
42
fastq
26
bed narrowPeak
10
bed bed3+
9
bigBed narrowPeak
3
bed broadPeak
3
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
22
in vitro differentiated cells
17
tissue
4
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
12
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
43
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
43
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
choroid plexus epithelial cell
1
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