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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
291
ChIP-seq
Assay category
425
Transcription
291
DNA binding
45
DNA accessibility
8
DNA methylation
3
3D chromatin structure
Target of assay
219
histone
219
histone modification
129
narrow histone mark
90
broad histone mark
52
control
20
transcription factor
8
RNA binding protein
Date released
91
November, 2017
84
October, 2019
50
August, 2017
28
May, 2019
23
October, 2018
15
October, 2017
Available data
233
bam
191
bigWig
177
bed narrowPeak
126
tagAlign
100
bigBed narrowPeak
55
fastq
16
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
tagAlign bed3+
Organism
291
Homo sapiens
Biosample type
282
tissue
9
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
291
AMP
Genome assembly (visualization)
189
GRCh38
142
hg19
Lab
291
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
16
missing controlled_by
organ_slims!
small intestine
BIOSAMPLE
ASSAY
291 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
layer of hippocampus
23
brain
20
substantia nigra
16
angular gyrus
15
+ See 68 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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