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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
415
total RNA-seq
291
ChIP-seq
34
DNase-seq
10
ATAC-seq
7
small RNA-seq
6
WGBS
4
pCHi-C
3
Hi-C
3
single cell RNA-seq
2
RRBS
1
FAIRE-seq
1
RNA microarray
Assay category
34
DNA accessibility
Date released
31
June, 2019
3
November, 2018
Available data
34
bam
34
bed bed3+
34
bed broadPeak
34
bed narrowPeak
34
bigBed broadPeak
34
bigBed narrowPeak
34
bigWig
3
fastq
Organism
34
Homo sapiens
Biosample type
29
tissue
5
primary cell
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
34
AMP
Genome assembly (visualization)
34
GRCh38
24
hg19
Lab
34
AMP-T2D consortium
organ_slims!
small intestine
BIOSAMPLE
ASSAY
34 results
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DNase-seq
tissue
brain
14
frontal cortex
2
omental fat pad
2
Ammon's horn
1
caudate nucleus
1
+ See 9 more…
primary cell
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
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