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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
ChIP-seq
40
DNase-seq
2
FAIRE-seq
Assay category
161
DNA binding
42
DNA accessibility
Target of assay
155
histone
155
histone modification
99
broad histone mark
56
narrow histone mark
6
RNA binding protein
6
transcription factor
Date released
64
May, 2019
63
November, 2017
34
June, 2019
33
October, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
419
bam
367
bigWig
329
bed narrowPeak
203
bigBed narrowPeak
124
tagAlign
94
tsv
57
bed broadPeak
48
bigBed broadPeak
44
bed bed3+
21
fastq
4
hdf5
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
1
bed bed3
1
tagAlign bed3+
1
tar
Organism
203
Homo sapiens
Biosample type
178
tissue
25
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
203
AMP
Genome assembly (visualization)
201
GRCh38
140
hg19
Lab
203
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
203 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
tibial artery
18
2
layer of hippocampus
16
ascending aorta
13
1
caudate nucleus
12
1
+ See 19 more…
primary cell
endothelial cell of umbilical vein
10
2
1
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
+ See 2 more…
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