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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
1
RRBS
Assay category
5
DNA accessibility
3
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
3
control
Date released
7
July, 2019
5
June, 2019
Available data
11
bigWig
8
bam
8
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
12
Homo sapiens
Biosample type
76
tissue
12
primary cell
Organ
314
epithelium
276
pancreas
27
connective tissue
21
kidney
14
vasculature
12
brain
11
blood vessel
10
liver
8
blood
8
bodily fluid
8
heart
5
vein
4
musculature of body
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
0
lung
Project
12
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
12 results
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DNase-seq
Hi-C
single cell RNA-seq
RRBS
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
cerebellar granule cell
2
choroid plexus epithelial cell
1
1
Purkinje cell
1
astrocyte of the hippocampus
1
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