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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
DNase-seq
3
Hi-C
1
RRBS
Assay category
9
DNA binding
5
DNA accessibility
3
3D chromatin structure
Transcription
1
DNA methylation
Target of assay
3
RNA binding protein
3
control
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
5
June, 2019
4
July, 2019
Available data
17
bigWig
14
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
174
tissue
18
primary cell
Organ
212
epithelium
164
pancreas
26
vasculature
25
kidney
20
blood vessel
20
connective tissue
18
brain
13
vein
9
heart
8
blood
8
bodily fluid
8
liver
8
musculature of body
5
eye
1
bone element
1
bone marrow
Project
18
AMP
Genome assembly (visualization)
18
hg19
11
GRCh38
Lab
18
AMP-T2D consortium
target.investigated_as!
broad histone mark
assay_slims!
Transcription
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
Hi-C
RRBS
primary cell
astrocyte of the cerebellum
3
1
1
brain microvascular endothelial cell
3
1
1
choroid plexus epithelial cell
3
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
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