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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
9
total RNA-seq
2
Capture-C
1
pCHi-C
Assay category
17
DNA accessibility
9
Transcription
Date released
August, 2017
13
February, 2023
8
February, 2021
4
August, 2021
2
October, 2019
1
August, 2018
1
May, 2021
Available data
9
bigWig
6
bed bed3+
5
bam
5
bed bed3
5
tsv
4
bed bedgraph
2
bed narrowPeak
2
bigBed narrowPeak
1
bedpe bed3+
1
fastq
Organism
29
Homo sapiens
Biosample type
490
tissue
39
primary cell
29
in vitro differentiated cells
1
stem cell
Organ
29
connective tissue
29
embryo
24
epithelium
15
liver
3
pancreas
1
adipose tissue
1
heart
Project
29
AMP
Genome assembly (visualization)
24
hg19
5
GRCh38
Lab
25
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
29 results
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ATAC-seq
total RNA-seq
Capture-C
pCHi-C
in vitro differentiated cells
adipocyte
8
5
1
chondrocyte
5
immature adipocyte
2
2
osteoblast
1
1
preadipocyte
1
1
cardiac fibroblast
1
white fat cell
1
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