Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
DNase-seq
Assay category
481
Transcription
153
DNA binding
25
DNA accessibility
7
DNA methylation
1
3D chromatin structure
Date released
10
February, 2023
5
February, 2021
3
October, 2019
2
August, 2021
1
August, 2017
1
January, 2018
1
November, 2019
1
November, 2020
1
October, 2017
Available data
9
bigWig
8
bed narrowPeak
6
bed bed3
5
bam
4
bed bed3+
4
bed bedgraph
4
bigBed narrowPeak
2
fastq
Organism
25
Homo sapiens
Biosample type
17
in vitro differentiated cells
6
tissue
2
primary cell
Organ
165
pancreas
104
epithelium
82
kidney
47
blood vessel
47
heart
47
vasculature
45
artery
28
eye
25
connective tissue
23
liver
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
limb
6
adipose tissue
5
brain
2
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
1
vein
Project
25
AMP
Genome assembly (visualization)
25
hg19
5
GRCh38
Lab
23
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
in vitro differentiated cells
adipocyte
8
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
adipose tissue
3
adipose tissue(adipose white tissue)
1
omental fat pad
1
subcutaneous adipose tissue
1
primary cell
osteoblast
2
Download