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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
95
ChIP-seq
17
ATAC-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
17
DNA accessibility
1
DNA methylation
Date released
9
February, 2023
4
February, 2021
3
October, 2019
1
January, 2018
1
July, 2019
Available data
9
bigWig
bed narrowPeak
6
bed bed3
5
bam
4
bed bed3+
4
bed bedgraph
4
bigBed narrowPeak
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
15
in vitro differentiated cells
2
tissue
1
primary cell
Organ
90
pancreas
73
epithelium
18
connective tissue
15
kidney
6
brain
6
musculature of body
4
bone element
4
skeleton
2
adipose tissue
2
eye
2
heart
2
liver
1
blood
1
bodily fluid
1
pericardium
1
pituitary gland
1
skin of body
1
vasculature
Project
18
AMP
Genome assembly (visualization)
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
18 results
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ATAC-seq
RRBS
in vitro differentiated cells
adipocyte
7
chondrocyte
5
immature adipocyte
2
preadipocyte
1
tissue
adipose tissue
2
primary cell
cardiac fibroblast
1
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