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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
9
DNA accessibility
Date released
6
June, 2019
2
August, 2021
1
August, 2017
1
November, 2018
1
November, 2020
Available data
10
bed bed3+
9
bam
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
9
bigWig
2
fastq
Organism
11
Homo sapiens
Biosample type
6
primary cell
3
in vitro differentiated cells
2
tissue
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
21
epithelium
18
ureter
11
connective tissue
11
vasculature
10
pancreas
9
blood vessel
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
11
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
9
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
11 results
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DNase-seq
Capture-C
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
tissue
omental fat pad
2
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